STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA63507.1Thiamine biosynthesis protein ApbE; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)    
Predicted Functional Partners:
APA63510.1
Na(+)-translocating NADH-quinone reductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
APA63511.1
Na(+)-translocating NADH-quinone reductase subunit D; Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.909
APA63513.1
Na(+)-translocating NADH-quinone reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.898
APA63509.1
Na(+)-translocating NADH-quinone reductase subunit F; Uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.879
APA63514.1
Na(+)-translocating NADH-quinone reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.869
APA63512.1
NADH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.862
APA63508.1
Na(+)-translocating NADH-quinone reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
Your Current Organism:
Maribacter sp. 12014MBLMicDiv
NCBI taxonomy Id: 1644130
Other names: M. sp. 1_2014MBL_MicDiv, Maribacter sp. 1_2014MBL_MicDiv
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