STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA64489.1Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)    
Predicted Functional Partners:
APA64490.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.700
APA66206.1
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
APA64491.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.672
APA63134.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.647
APA64500.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.584
APA64494.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.563
APA64406.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.547
APA64492.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.546
APA63139.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.499
APA65405.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.480
Your Current Organism:
Maribacter sp. 12014MBLMicDiv
NCBI taxonomy Id: 1644130
Other names: M. sp. 1_2014MBL_MicDiv, Maribacter sp. 1_2014MBL_MicDiv
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.