STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APA64627.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)    
Predicted Functional Partners:
APA64628.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
APA64629.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.622
APA64630.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
APA64632.1
mRNA 3'-end processing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
APA64631.1
ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
APA63481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.437
APA66326.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.437
APA64633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.437
APA63765.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
APA66310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Maribacter sp. 12014MBLMicDiv
NCBI taxonomy Id: 1644130
Other names: M. sp. 1_2014MBL_MicDiv, Maribacter sp. 1_2014MBL_MicDiv
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.