STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001280505_00461Unannotated protein. (257 aa)    
Predicted Functional Partners:
GCA_001280505_00462
Unannotated protein.
 
 0.999
GCA_001280505_00471
Unannotated protein.
 
 0.997
GCA_001280505_00460
Unannotated protein.
 
 
 0.954
GCA_001280505_02520
Unannotated protein.
    
 0.894
GCA_001280505_02324
Unannotated protein.
   
 
 0.818
GCA_001280505_00473
Unannotated protein.
 
 
 0.808
GCA_001280505_03181
Unannotated protein.
   
 0.779
GCA_001280505_00812
Unannotated protein.
     
 0.700
GCA_001280505_00437
Unannotated protein.
     
 0.641
GCA_001280505_00496
Unannotated protein.
     
 0.641
Your Current Organism:
Mangrovimonas sp. TPBH4
NCBI taxonomy Id: 1645914
Other names: M. sp. TPBH4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.