Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMS11269.1 | TraB | A2I91_05815 | A2I91_08855 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| AMS11269.1 | appC | A2I91_05815 | A2I91_07270 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.715 |
| AMS11269.1 | secY | A2I91_05815 | A2I91_03575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.466 |
| AMS11718.1 | TraB | A2I91_08210 | A2I91_08855 | Subtilase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| AMS11718.1 | appC | A2I91_08210 | A2I91_07270 | Subtilase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| AMS11718.1 | secY | A2I91_08210 | A2I91_03575 | Subtilase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.480 |
| AMS11833.1 | TraB | A2I91_08850 | A2I91_08855 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| TraB | AMS11269.1 | A2I91_08855 | A2I91_05815 | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| TraB | AMS11718.1 | A2I91_08855 | A2I91_08210 | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Subtilase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. | 0.450 |
| TraB | AMS11833.1 | A2I91_08855 | A2I91_08850 | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| TraB | appC | A2I91_08855 | A2I91_07270 | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
| TraB | secY | A2I91_08855 | A2I91_03575 | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.506 |
| appC | AMS11269.1 | A2I91_07270 | A2I91_05815 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.715 |
| appC | AMS11718.1 | A2I91_07270 | A2I91_08210 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Subtilase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. | 0.773 |
| appC | TraB | A2I91_07270 | A2I91_08855 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
| appC | secY | A2I91_07270 | A2I91_03575 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.507 |
| secY | AMS11269.1 | A2I91_03575 | A2I91_05815 | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.466 |
| secY | AMS11718.1 | A2I91_03575 | A2I91_08210 | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Subtilase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. | 0.480 |
| secY | TraB | A2I91_03575 | A2I91_08855 | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Pheromone shutdown protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
| secY | appC | A2I91_03575 | A2I91_07270 | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |