STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001484965_01296Unannotated protein. (80 aa)    
Predicted Functional Partners:
GCA_001484965_01803
Unannotated protein.
  
 
 0.997
GCA_001484965_01809
Unannotated protein.
  
 
 0.997
GCA_001484965_02626
Unannotated protein.
  
 
 0.996
GCA_001484965_00209
Unannotated protein.
  
 
 0.995
GCA_001484965_00758
Unannotated protein.
  
 
 0.995
GCA_001484965_00760
Unannotated protein.
  
 
 0.995
GCA_001484965_03049
Unannotated protein.
  
 
 0.995
GCA_001484965_00599
Unannotated protein.
  
 
 0.994
GCA_001484965_00662
Unannotated protein.
 
 
 0.994
GCA_001484965_00663
Unannotated protein.
  
 
 0.994
Your Current Organism:
Bacillus shacheensis
NCBI taxonomy Id: 1649580
Other names: B. shacheensis, Bacillus shacheensis Lei et al. 2014, Bacillus sp. SCULCB HNA-14, DSM 26902, KCTC 33145, strain HNA-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.