STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL72990.1PFAM: Domain of unknown function (DUF222); HNH endonuclease. (276 aa)    
Predicted Functional Partners:
AKL72713.1
PFAM: Domain of unknown function (DUF4095); Protein of unknown function (DUF559).
  
     0.618
AKL72771.1
PFAM: AAA domain.
  
     0.588
AKL72773.1
Flp pilus assembly protein TadB.
  
     0.575
AKL72989.1
Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain.
       0.556
AKL72991.1
PFAM: Domain of unknown function (DUF222).
       0.541
AKL73560.1
TIGRFAM: Flp pilus assembly protein CpaB.
  
     0.493
Your Current Organism:
Actinobacteria bacterium IMCC26256
NCBI taxonomy Id: 1650658
Other names: A. bacterium IMCC26256
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.