STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403615_01099Unannotated protein. (81 aa)    
Predicted Functional Partners:
GCA_001403615_01100
Unannotated protein.
       0.714
GCA_001403615_02971
Unannotated protein.
   
 
  0.690
GCA_001403615_00564
Unannotated protein.
  
 
  0.666
GCA_001403615_04256
Unannotated protein.
  
 
  0.666
GCA_001403615_02964
Unannotated protein.
    
  0.607
GCA_001403615_01922
Unannotated protein.
   
 
 0.552
GCA_001403615_02899
Unannotated protein.
  
  
 0.543
GCA_001403615_02360
Unannotated protein.
  
  
 0.502
GCA_001403615_01950
Unannotated protein.
   
  
 0.472
GCA_001403615_05174
Unannotated protein.
   
  
 0.472
Your Current Organism:
Desnuesiella massiliensis
NCBI taxonomy Id: 1650662
Other names: CSUR P1918, Clostridiaceae bacterium mt10, D. massiliensis, DSM 101500, strain mt10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.