STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403615_01658Unannotated protein. (265 aa)    
Predicted Functional Partners:
GCA_001403615_01657
Unannotated protein.
 
  
 0.961
GCA_001403615_01656
Unannotated protein.
 
     0.837
GCA_001403615_02749
Unannotated protein.
 
    0.606
GCA_001403615_01055
Unannotated protein.
 
  
 0.587
GCA_001403615_01199
Unannotated protein.
  
    0.552
GCA_001403615_04959
Unannotated protein.
  
    0.552
GCA_001403615_02859
Unannotated protein.
  
  
 0.510
GCA_001403615_02860
Unannotated protein.
 
  
 0.510
GCA_001403615_02858
Unannotated protein.
 
  
 0.480
GCA_001403615_01655
Unannotated protein.
       0.427
Your Current Organism:
Desnuesiella massiliensis
NCBI taxonomy Id: 1650662
Other names: CSUR P1918, Clostridiaceae bacterium mt10, D. massiliensis, DSM 101500, strain mt10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.