STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403615_04990Unannotated protein. (475 aa)    
Predicted Functional Partners:
GCA_001403615_04991
Unannotated protein.
 
     0.814
GCA_001403615_02983
Unannotated protein.
   
 
 0.786
GCA_001403615_04989
Unannotated protein.
       0.773
GCA_001403615_01868
Unannotated protein.
 
 
 
0.651
GCA_001403615_04992
Unannotated protein.
       0.553
GCA_001403615_05047
Unannotated protein.
  
     0.428
GCA_001403615_03913
Unannotated protein.
  
     0.419
GCA_001403615_04988
Unannotated protein.
       0.412
GCA_001403615_04993
Unannotated protein.
       0.407
Your Current Organism:
Desnuesiella massiliensis
NCBI taxonomy Id: 1650662
Other names: CSUR P1918, Clostridiaceae bacterium mt10, D. massiliensis, DSM 101500, strain mt10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.