STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD77_12620Unannotated protein. (360 aa)    
Predicted Functional Partners:
EDD77_11715
Unannotated protein.
 
 
 
 0.652
EDD77_109116
Unannotated protein.
   
 
 0.604
EDD77_11515
Unannotated protein.
   
 
 0.604
EDD77_12545
Unannotated protein.
   
 
 0.604
EDD77_103140
Unannotated protein.
  
   0.553
GCA_001486665_00221
Unannotated protein.
  
   0.544
EDD77_11272
Unannotated protein.
  
   0.529
EDD77_12832
Unannotated protein.
  
   0.478
EDD77_11185
Unannotated protein.
  
     0.459
EDD77_13827
Unannotated protein.
  
   0.450
Your Current Organism:
Fournierella massiliensis
NCBI taxonomy Id: 1650663
Other names: CSUR P2014, DSM 100451, F. massiliensis, Fournierella massiliensis Togo et al. 2017, Ruminococcaceae bacterium AT2, strain AT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.