STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD77_10798Unannotated protein; Belongs to the 'phage' integrase family. (370 aa)    
Predicted Functional Partners:
EDD77_12717
Unannotated protein.
    
  0.778
EDD77_1028
Unannotated protein.
  
     0.696
ispH
Unannotated protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
     0.601
EDD77_11064
Unannotated protein.
  
     0.600
EDD77_1051
Unannotated protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
   
 0.536
EDD77_10429
Unannotated protein; Essential cell division protein.
  
    0.524
EDD77_10648
Unannotated protein.
  
     0.521
rpmD
Unannotated protein.
  
    0.504
EDD77_14015
Unannotated protein.
  
     0.494
EDD77_11350
Unannotated protein.
  
     0.480
Your Current Organism:
Fournierella massiliensis
NCBI taxonomy Id: 1650663
Other names: CSUR P2014, DSM 100451, F. massiliensis, Fournierella massiliensis Togo et al. 2017, Ruminococcaceae bacterium AT2, strain AT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.