STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD77_11463Unannotated protein. (147 aa)    
Predicted Functional Partners:
argS
Unannotated protein.
  
    0.918
ddl
Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
    0.808
murI
Unannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis.
  
    0.774
EDD77_11064
Unannotated protein.
 
     0.718
EDD77_10760
Unannotated protein.
  
     0.703
EDD77_10655
Unannotated protein.
   
    0.625
EDD77_107121
Unannotated protein.
  
     0.601
EDD77_12936
Unannotated protein.
  
     0.569
rpmD
Unannotated protein.
  
     0.562
EDD77_1028
Unannotated protein.
  
     0.508
Your Current Organism:
Fournierella massiliensis
NCBI taxonomy Id: 1650663
Other names: CSUR P2014, DSM 100451, F. massiliensis, Fournierella massiliensis Togo et al. 2017, Ruminococcaceae bacterium AT2, strain AT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.