STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD77_11754Unannotated protein. (210 aa)    
Predicted Functional Partners:
EDD77_11755
Unannotated protein.
       0.773
EDD77_11756
Unannotated protein.
       0.773
EDD77_11757
Unannotated protein.
       0.737
ligA-2
Unannotated protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.533
EDD77_11759
Unannotated protein.
       0.533
EDD77_11760
Unannotated protein.
       0.533
EDD77_11761
Unannotated protein.
       0.523
EDD77_11753
Unannotated protein.
       0.470
EDD77_11762
Unannotated protein.
       0.408
Your Current Organism:
Fournierella massiliensis
NCBI taxonomy Id: 1650663
Other names: CSUR P2014, DSM 100451, F. massiliensis, Fournierella massiliensis Togo et al. 2017, Ruminococcaceae bacterium AT2, strain AT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.