STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD77_110103Unannotated protein. (210 aa)    
Predicted Functional Partners:
EDD77_11097
Unannotated protein; Belongs to the EutP/PduV family.
 
  
 0.955
EDD77_110102
Unannotated protein.
 
  
 0.954
EDD77_110100
Unannotated protein.
 
  
 0.953
EDD77_110101
Unannotated protein.
 
     0.939
EDD77_11096
Unannotated protein.
 
   
 0.931
EDD77_110105
Unannotated protein.
 
  
 0.876
EDD77_110104
Unannotated protein.
 
  
 0.870
EDD77_11099
Unannotated protein.
  
  
 0.853
EDD77_11089
Unannotated protein.
 
     0.823
cutC
Unannotated protein; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
 
    0.785
Your Current Organism:
Fournierella massiliensis
NCBI taxonomy Id: 1650663
Other names: CSUR P2014, DSM 100451, F. massiliensis, Fournierella massiliensis Togo et al. 2017, Ruminococcaceae bacterium AT2, strain AT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.