STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDD77_11568Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (325 aa)    
Predicted Functional Partners:
EDD77_11567
Unannotated protein.
  
 0.996
EDD77_11566
Unannotated protein.
 
  
 0.989
EDD77_11569
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
0.987
EDD77_114101
Unannotated protein.
    0.688
EDD77_11632
Unannotated protein.
    0.685
EDD77_11919
Unannotated protein.
    0.629
EDD77_114100
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
0.555
EDD77_11631
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
0.551
EDD77_11920
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
0.518
EDD77_11570
Unannotated protein; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
       0.449
Your Current Organism:
Fournierella massiliensis
NCBI taxonomy Id: 1650663
Other names: CSUR P2014, DSM 100451, F. massiliensis, Fournierella massiliensis Togo et al. 2017, Ruminococcaceae bacterium AT2, strain AT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.