STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thyA1Thymidylate synthase 1. (276 aa)    
Predicted Functional Partners:
dfrA
Dihydrofolate reductase.
 
 0.999
ribD_2
Riboflavin biosynthesis protein RibD.
    
 0.937
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
  
 0.893
tdk
Thymidine kinase.
  
 
 0.886
glyA
Pyridoxal-phosphate-dependent serine hydroxymethyltransferase.
  
 
 0.830
tmk
Thymidylate kinase.
  
 
 0.817
ribD_1
Riboflavin biosynthesis protein RibD.
  
 
 0.813
folD
Bifunctional protein FolD.
  
 
 0.807
fgs
Folylpolyglutamate synthase.
     
 0.798
metF
5%2C10-methylenetetrahydrofolate reductase.
     
 0.798
Your Current Organism:
uncultured Eubacterium sp.
NCBI taxonomy Id: 165185
Other names: u. Eubacterium sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.