Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCH04374.1 | cysE | SAMEA3545284_00272 | SAMEA3545284_00277 | Putative TrmH family tRNA/rRNA methyltransferase. | Serine acetyltransferase. | 0.554 |
SCH04374.1 | cysS | SAMEA3545284_00272 | SAMEA3545284_00276 | Putative TrmH family tRNA/rRNA methyltransferase. | Cysteine--tRNA ligase. | 0.873 |
SCH04374.1 | mrnC | SAMEA3545284_00272 | SAMEA3545284_00275 | Putative TrmH family tRNA/rRNA methyltransferase. | Mini-ribonuclease 3. | 0.872 |
SCH04374.1 | rplC | SAMEA3545284_00272 | SAMEA3545284_00417 | Putative TrmH family tRNA/rRNA methyltransferase. | 50S ribosomal protein L3. | 0.853 |
SCH04374.1 | rplO | SAMEA3545284_00272 | SAMEA3545284_00398 | Putative TrmH family tRNA/rRNA methyltransferase. | 50S ribosomal protein L15. | 0.843 |
SCH04374.1 | sigH | SAMEA3545284_00272 | SAMEA3545284_00271 | Putative TrmH family tRNA/rRNA methyltransferase. | Stage 0 sporulation protein H. | 0.834 |
SCH04374.1 | tetM_1 | SAMEA3545284_00272 | SAMEA3545284_01221 | Putative TrmH family tRNA/rRNA methyltransferase. | Tetracycline resistance protein tetM. | 0.517 |
SCH04374.1 | thyA1 | SAMEA3545284_00272 | SAMEA3545284_00274 | Putative TrmH family tRNA/rRNA methyltransferase. | Thymidylate synthase 1. | 0.624 |
SCH52609.1 | SCH86519.1 | SAMEA3545284_01217 | SAMEA3545284_01869 | Photosystem II S4 domain protein. | Fibronectin-binding protein A N-terminus (FbpA). | 0.424 |
SCH52609.1 | mrnC | SAMEA3545284_01217 | SAMEA3545284_00275 | Photosystem II S4 domain protein. | Mini-ribonuclease 3. | 0.728 |
SCH52609.1 | rplC | SAMEA3545284_01217 | SAMEA3545284_00417 | Photosystem II S4 domain protein. | 50S ribosomal protein L3. | 0.469 |
SCH52609.1 | rplO | SAMEA3545284_01217 | SAMEA3545284_00398 | Photosystem II S4 domain protein. | 50S ribosomal protein L15. | 0.425 |
SCH86519.1 | SCH52609.1 | SAMEA3545284_01869 | SAMEA3545284_01217 | Fibronectin-binding protein A N-terminus (FbpA). | Photosystem II S4 domain protein. | 0.424 |
SCH86519.1 | mrnC | SAMEA3545284_01869 | SAMEA3545284_00275 | Fibronectin-binding protein A N-terminus (FbpA). | Mini-ribonuclease 3. | 0.756 |
SCH86519.1 | rplC | SAMEA3545284_01869 | SAMEA3545284_00417 | Fibronectin-binding protein A N-terminus (FbpA). | 50S ribosomal protein L3. | 0.856 |
SCH86519.1 | rplO | SAMEA3545284_01869 | SAMEA3545284_00398 | Fibronectin-binding protein A N-terminus (FbpA). | 50S ribosomal protein L15. | 0.839 |
cysE | SCH04374.1 | SAMEA3545284_00277 | SAMEA3545284_00272 | Serine acetyltransferase. | Putative TrmH family tRNA/rRNA methyltransferase. | 0.554 |
cysE | cysS | SAMEA3545284_00277 | SAMEA3545284_00276 | Serine acetyltransferase. | Cysteine--tRNA ligase. | 0.993 |
cysE | mrnC | SAMEA3545284_00277 | SAMEA3545284_00275 | Serine acetyltransferase. | Mini-ribonuclease 3. | 0.738 |
cysE | sigH | SAMEA3545284_00277 | SAMEA3545284_00271 | Serine acetyltransferase. | Stage 0 sporulation protein H. | 0.591 |
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