Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCH34479.1 | SCH34553.1 | SAMEA3545284_00896 | SAMEA3545284_00898 | Uncharacterised protein. | Uncharacterised protein. | 0.495 |
SCH34479.1 | glxK | SAMEA3545284_00896 | SAMEA3545284_00895 | Uncharacterised protein. | Glycerate kinase. | 0.548 |
SCH34479.1 | putP_2 | SAMEA3545284_00896 | SAMEA3545284_00897 | Uncharacterised protein. | Proline permease. | 0.737 |
SCH34553.1 | SCH34479.1 | SAMEA3545284_00898 | SAMEA3545284_00896 | Uncharacterised protein. | Uncharacterised protein. | 0.495 |
SCH34553.1 | putP_2 | SAMEA3545284_00898 | SAMEA3545284_00897 | Uncharacterised protein. | Proline permease. | 0.517 |
actP_1 | putP_2 | SAMEA3545284_00047 | SAMEA3545284_00897 | Acetate transporter ActP. | Proline permease. | 0.752 |
actP_1 | putP_4 | SAMEA3545284_00047 | SAMEA3545284_01743 | Acetate transporter ActP. | Proline permease. | 0.751 |
actP_1 | putP_5 | SAMEA3545284_00047 | SAMEA3545284_01779 | Acetate transporter ActP. | Proline permease. | 0.759 |
actP_1 | rcsC | SAMEA3545284_00047 | SAMEA3545284_01006 | Acetate transporter ActP. | Sensor kinase protein RcsC. | 0.840 |
glxK | SCH34479.1 | SAMEA3545284_00895 | SAMEA3545284_00896 | Glycerate kinase. | Uncharacterised protein. | 0.548 |
glxK | putP_2 | SAMEA3545284_00895 | SAMEA3545284_00897 | Glycerate kinase. | Proline permease. | 0.524 |
panF_1 | putP_2 | SAMEA3545284_00384 | SAMEA3545284_00897 | Pantothenate permease. | Proline permease. | 0.745 |
panF_1 | putP_3 | SAMEA3545284_00384 | SAMEA3545284_01435 | Pantothenate permease. | Proline permease. | 0.544 |
panF_1 | putP_5 | SAMEA3545284_00384 | SAMEA3545284_01779 | Pantothenate permease. | Proline permease. | 0.755 |
panF_1 | rcsC | SAMEA3545284_00384 | SAMEA3545284_01006 | Pantothenate permease. | Sensor kinase protein RcsC. | 0.840 |
panF_2 | putP_2 | SAMEA3545284_00466 | SAMEA3545284_00897 | Pantothenate permease. | Proline permease. | 0.762 |
panF_2 | rcsC | SAMEA3545284_00466 | SAMEA3545284_01006 | Pantothenate permease. | Sensor kinase protein RcsC. | 0.840 |
putP_2 | SCH34479.1 | SAMEA3545284_00897 | SAMEA3545284_00896 | Proline permease. | Uncharacterised protein. | 0.737 |
putP_2 | SCH34553.1 | SAMEA3545284_00897 | SAMEA3545284_00898 | Proline permease. | Uncharacterised protein. | 0.517 |
putP_2 | actP_1 | SAMEA3545284_00897 | SAMEA3545284_00047 | Proline permease. | Acetate transporter ActP. | 0.752 |
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