STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpBSegregation and condensation protein B. (201 aa)    
Predicted Functional Partners:
scpA
Segregation and condensation protein A.
 
 
 0.999
smc
Chromosome partition protein Smc.
 
 
 0.853
cmk
Cytidylate kinase.
 
  
 0.702
dacB_1
D-alanyl-D-alanine carboxypeptidase dacB precursor.
       0.647
rluB
Ribosomal large subunit pseudouridine synthase B.
 
  
 0.641
fruA
EIIABC-Fru.
   
  
 0.581
topA
DNA topoisomerase 1.
  
    0.522
der
GTP-binding protein EngA.
  
  
 0.439
mnmE_2
tRNA modification GTPase MnmE.
  
  
 0.436
ribF
Riboflavin biosynthesis protein ribF.
   
    0.434
Your Current Organism:
uncultured Eubacterium sp.
NCBI taxonomy Id: 165185
Other names: u. Eubacterium sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.