STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH62892.1Predicted transcriptional regulator. (45 aa)    
Predicted Functional Partners:
dfa1
Diflavin flavoprotein A 1.
  
  
 0.795
dfx_2
Desulfoferrodoxin.
  
     0.764
ygaD
Competence damage-inducible protein A.
    
 0.692
porA_2
Pyruvate synthase subunit porA.
  
 
 0.660
SCH05276.1
Acyl-CoA dehydrogenase%2C short-chain specific.
  
 
 0.481
sphR_2
Alkaline phosphatase synthesis transcriptional regulatory protein sphR.
  
    0.458
SCH24153.1
Uncharacterised protein.
  
     0.449
phoR_4
Alkaline phosphatase synthesis sensor protein phoR.
       0.438
scpC_2
Propionyl-CoA:succinate CoA transferase.
       0.427
aroE
Shikimate dehydrogenase.
  
 
 0.400
Your Current Organism:
uncultured Eubacterium sp.
NCBI taxonomy Id: 165185
Other names: u. Eubacterium sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.