STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sphR_2Alkaline phosphatase synthesis transcriptional regulatory protein sphR. (230 aa)    
Predicted Functional Partners:
rcsC
Sensor kinase protein RcsC.
 
0.998
phoR_4
Alkaline phosphatase synthesis sensor protein phoR.
 
  0.971
zraS_1
Sensor protein ZraS.
 
 0.914
rpfC
Sensory/regulatory protein RpfC.
 0.883
phoR_1
Alkaline phosphatase synthesis sensor protein phoR.
  
  0.879
phoR_3
Alkaline phosphatase synthesis sensor protein phoR.
  
  0.868
phoR_6
Alkaline phosphatase synthesis sensor protein phoR.
  
  0.847
SCH63099.1
Lipoprotein releasing system%2C transmembrane protein%2C LolC/E family.
 
     0.790
zraS_2
Sensor protein ZraS.
  
 0.777
phoR_5
Alkaline phosphatase synthesis sensor protein phoR.
 
  0.776
Your Current Organism:
uncultured Eubacterium sp.
NCBI taxonomy Id: 165185
Other names: u. Eubacterium sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.