Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCH89080.1 | SCH89209.1 | SAMEA3545284_01943 | SAMEA3545284_01947 | Resolvase%2C N terminal domain. | Plasmid recombination enzyme. | 0.882 |
SCH89080.1 | SCH89238.1 | SAMEA3545284_01943 | SAMEA3545284_01948 | Resolvase%2C N terminal domain. | Uncharacterised protein. | 0.771 |
SCH89080.1 | SCH89306.1 | SAMEA3545284_01943 | SAMEA3545284_01950 | Resolvase%2C N terminal domain. | RNA polymerase sigma factor. | 0.769 |
SCH89080.1 | SCH89339.1 | SAMEA3545284_01943 | SAMEA3545284_01951 | Resolvase%2C N terminal domain. | RNA polymerase sigma factor SigB. | 0.761 |
SCH89080.1 | SCH89409.1 | SAMEA3545284_01943 | SAMEA3545284_01953 | Resolvase%2C N terminal domain. | Uncharacterised protein. | 0.752 |
SCH89080.1 | parB_3 | SAMEA3545284_01943 | SAMEA3545284_01946 | Resolvase%2C N terminal domain. | Probable chromosome-partitioning protein parB. | 0.875 |
SCH89209.1 | SCH89080.1 | SAMEA3545284_01947 | SAMEA3545284_01943 | Plasmid recombination enzyme. | Resolvase%2C N terminal domain. | 0.882 |
SCH89209.1 | SCH89238.1 | SAMEA3545284_01947 | SAMEA3545284_01948 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.773 |
SCH89209.1 | SCH89306.1 | SAMEA3545284_01947 | SAMEA3545284_01950 | Plasmid recombination enzyme. | RNA polymerase sigma factor. | 0.770 |
SCH89209.1 | SCH89339.1 | SAMEA3545284_01947 | SAMEA3545284_01951 | Plasmid recombination enzyme. | RNA polymerase sigma factor SigB. | 0.727 |
SCH89209.1 | SCH89409.1 | SAMEA3545284_01947 | SAMEA3545284_01953 | Plasmid recombination enzyme. | Uncharacterised protein. | 0.751 |
SCH89209.1 | parB_3 | SAMEA3545284_01947 | SAMEA3545284_01946 | Plasmid recombination enzyme. | Probable chromosome-partitioning protein parB. | 0.953 |
SCH89238.1 | SCH89080.1 | SAMEA3545284_01948 | SAMEA3545284_01943 | Uncharacterised protein. | Resolvase%2C N terminal domain. | 0.771 |
SCH89238.1 | SCH89209.1 | SAMEA3545284_01948 | SAMEA3545284_01947 | Uncharacterised protein. | Plasmid recombination enzyme. | 0.773 |
SCH89238.1 | SCH89306.1 | SAMEA3545284_01948 | SAMEA3545284_01950 | Uncharacterised protein. | RNA polymerase sigma factor. | 0.772 |
SCH89238.1 | SCH89339.1 | SAMEA3545284_01948 | SAMEA3545284_01951 | Uncharacterised protein. | RNA polymerase sigma factor SigB. | 0.749 |
SCH89238.1 | SCH89409.1 | SAMEA3545284_01948 | SAMEA3545284_01953 | Uncharacterised protein. | Uncharacterised protein. | 0.744 |
SCH89238.1 | parB_3 | SAMEA3545284_01948 | SAMEA3545284_01946 | Uncharacterised protein. | Probable chromosome-partitioning protein parB. | 0.756 |
SCH89272.1 | SCH89306.1 | SAMEA3545284_01949 | SAMEA3545284_01950 | Uncharacterised protein. | RNA polymerase sigma factor. | 0.582 |
SCH89272.1 | SCH89339.1 | SAMEA3545284_01949 | SAMEA3545284_01951 | Uncharacterised protein. | RNA polymerase sigma factor SigB. | 0.468 |
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