STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
irtAIron import ATP-binding/permease protein IrtA. (589 aa)    
Predicted Functional Partners:
ppsE
Beta-ketoacyl-acyl-carrier-protein synthase I.
 
 0.883
metN
Methionine import ATP-binding protein MetN.
 
   
 
0.872
kstR2
HTH-type transcriptional repressor KstR2.
 
     0.860
lagD
Lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
 
0.836
SCH90903.1
Putative multidrug export ATP-binding/permease protein SAV1866.
 
    
0.826
SCH22880.1
ABC-type cobalt transport system%2C permease component CbiQ and related transporters.
  
  
  0.701
pksJ
Polyketide synthase PksJ.
  
 0.693
dnaK
Heat shock protein 70.
  
 0.689
acrR_2
Potential acrAB operon repressor.
  
     0.671
SCH97558.1
Uncharacterised protein.
   
 0.643
Your Current Organism:
uncultured Eubacterium sp.
NCBI taxonomy Id: 165185
Other names: u. Eubacterium sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.