STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydiCUGMP family protein. (236 aa)    
Predicted Functional Partners:
ydiB
ADP-binding protein.
 
 0.999
gcp_1
t(6)A37 threonylcarbamoyladenosine biosynthesis protein.
 
0.997
SCG93267.1
Ribosomal-protein-alanine N-acetyltransferase.
 
 0.994
gcp_2
t(6)A37 threonylcarbamoyladenosine biosynthesis protein.
  
 0.957
birA
Bifunctional protein BirA.
 
    0.949
thiL
Thiamine-monophosphate kinase.
  
    0.849
rimN
t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN.
    
 0.808
pdtaS
Probable sensor histidine kinase pdtaS.
       0.785
ribD
Riboflavin biosynthesis protein RibD.
    
  0.742
pdtaR
Probable transcriptional regulatory protein pdtaR.
       0.741
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.