Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCG99273.1 | SCG99307.1 | SAMEA3545320_00142 | SAMEA3545320_00143 | Metal-dependent hydrolase. | Uncharacterised protein. | 0.757 |
SCG99273.1 | SCG99395.1 | SAMEA3545320_00142 | SAMEA3545320_00145 | Metal-dependent hydrolase. | Protein of uncharacterised function (DUF964). | 0.491 |
SCG99273.1 | fruA | SAMEA3545320_00142 | SAMEA3545320_00893 | Metal-dependent hydrolase. | EIIABC-Fru. | 0.667 |
SCG99273.1 | licR | SAMEA3545320_00142 | SAMEA3545320_02067 | Metal-dependent hydrolase. | Probable licABCH operon regulator. | 0.672 |
SCG99273.1 | murB | SAMEA3545320_00142 | SAMEA3545320_00146 | Metal-dependent hydrolase. | UDP-N-acetylenolpyruvoylglucosamine reductase. | 0.465 |
SCG99273.1 | trmL | SAMEA3545320_00142 | SAMEA3545320_00144 | Metal-dependent hydrolase. | tRNA (cytidine(34)-2'-O)-methyltransferase. | 0.523 |
SCG99307.1 | SCG99273.1 | SAMEA3545320_00143 | SAMEA3545320_00142 | Uncharacterised protein. | Metal-dependent hydrolase. | 0.757 |
SCG99307.1 | SCG99395.1 | SAMEA3545320_00143 | SAMEA3545320_00145 | Uncharacterised protein. | Protein of uncharacterised function (DUF964). | 0.477 |
SCG99307.1 | murB | SAMEA3545320_00143 | SAMEA3545320_00146 | Uncharacterised protein. | UDP-N-acetylenolpyruvoylglucosamine reductase. | 0.477 |
SCG99307.1 | trmL | SAMEA3545320_00143 | SAMEA3545320_00144 | Uncharacterised protein. | tRNA (cytidine(34)-2'-O)-methyltransferase. | 0.515 |
SCG99395.1 | SCG99273.1 | SAMEA3545320_00145 | SAMEA3545320_00142 | Protein of uncharacterised function (DUF964). | Metal-dependent hydrolase. | 0.491 |
SCG99395.1 | SCG99307.1 | SAMEA3545320_00145 | SAMEA3545320_00143 | Protein of uncharacterised function (DUF964). | Uncharacterised protein. | 0.477 |
SCG99395.1 | murB | SAMEA3545320_00145 | SAMEA3545320_00146 | Protein of uncharacterised function (DUF964). | UDP-N-acetylenolpyruvoylglucosamine reductase. | 0.809 |
SCG99395.1 | trmL | SAMEA3545320_00145 | SAMEA3545320_00144 | Protein of uncharacterised function (DUF964). | tRNA (cytidine(34)-2'-O)-methyltransferase. | 0.757 |
fruA | SCG99273.1 | SAMEA3545320_00893 | SAMEA3545320_00142 | EIIABC-Fru. | Metal-dependent hydrolase. | 0.667 |
fruA | licR | SAMEA3545320_00893 | SAMEA3545320_02067 | EIIABC-Fru. | Probable licABCH operon regulator. | 0.996 |
licR | SCG99273.1 | SAMEA3545320_02067 | SAMEA3545320_00142 | Probable licABCH operon regulator. | Metal-dependent hydrolase. | 0.672 |
licR | fruA | SAMEA3545320_02067 | SAMEA3545320_00893 | Probable licABCH operon regulator. | EIIABC-Fru. | 0.996 |
murB | SCG99273.1 | SAMEA3545320_00146 | SAMEA3545320_00142 | UDP-N-acetylenolpyruvoylglucosamine reductase. | Metal-dependent hydrolase. | 0.465 |
murB | SCG99307.1 | SAMEA3545320_00146 | SAMEA3545320_00143 | UDP-N-acetylenolpyruvoylglucosamine reductase. | Uncharacterised protein. | 0.477 |
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