STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH23615.1Uncharacterised protein. (325 aa)    
Predicted Functional Partners:
SCH23570.1
Anaerobic benzoate catabolism transcriptional regulator.
       0.661
ppnK
Probable inorganic polyphosphate/ATP-NAD kinase.
     
 0.530
SCH10168.1
Divergent AAA domain.
 
 
  0.500
rpoZ
DNA-directed RNA polymerase subunit omega.
    
   0.451
rpoB
DNA-directed RNA polymerase subunit beta.
    
   0.451
rpoC
DNA-directed RNA polymerase subunit beta'.
    
   0.451
rpoA
DNA-directed RNA polymerase subunit alpha.
    
   0.451
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.