STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase. (130 aa)    
Predicted Functional Partners:
coaE
Dephospho-CoA kinase.
 
    0.871
cca
CCA-adding enzyme.
  
  
 0.827
gltB
Ferredoxin-dependent glutamate synthase 1.
    
  0.799
pyk
Pyruvate kinase.
     
 0.796
dapB
Dihydrodipicolinate reductase.
  
    0.768
SCH78598.1
Aminoglycoside-2''-adenylyltransferase.
  
  
 0.750
birA
Bifunctional protein BirA.
  
  
 0.724
pyrB
Aspartate carbamoyltransferase.
    
 0.650
carA
Carbamoyl-phosphate synthase small chain.
  
 
 0.641
purF
Amidophosphoribosyltransferase precursor.
     
 0.560
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.