STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mobBMolybdopterin-guanine dinucleotide biosynthesis protein B. (365 aa)    
Predicted Functional Partners:
moeA
Molybdopterin molybdenumtransferase.
  
  0.962
fdhF_1
Formate dehydrogenase H.
 
     0.849
fdhF_2
Formate dehydrogenase H.
 
     0.819
ppnK
Probable inorganic polyphosphate/ATP-NAD kinase.
  
 
  0.640
moaA_1
Molybdenum cofactor biosynthesis protein A.
 
  
  0.613
moaA_3
Probable molybdopterin cofactor synthesis protein A.
 
  
  0.592
hyfA
Hydrogenase-4 component A.
 
     0.587
dmsA
Dimethyl sulfoxide reductase DmsA precursor.
  
     0.559
thyA1
Thymidylate synthase 1.
  
 
  0.556
SCH29297.1
Formate dehydrogenase accessory protein.
 
     0.553
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.