Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplD | rpsB | SAMEA3545320_01989 | SAMEA3545320_00821 | 50S ribosomal protein L4. | Vegetative protein 209. | 0.999 |
rplD | rpsD | SAMEA3545320_01989 | SAMEA3545320_01123 | 50S ribosomal protein L4. | 30S ribosomal protein S4. | 0.999 |
rplD | rpsF | SAMEA3545320_01989 | SAMEA3545320_00389 | 50S ribosomal protein L4. | BS9. | 0.994 |
rplD | rpsG | SAMEA3545320_01989 | SAMEA3545320_01984 | 50S ribosomal protein L4. | 30S ribosomal protein S7. | 0.999 |
rplD | rpsI | SAMEA3545320_01989 | SAMEA3545320_00037 | 50S ribosomal protein L4. | BS10. | 0.998 |
rplD | rpsJ | SAMEA3545320_01989 | SAMEA3545320_01987 | 50S ribosomal protein L4. | BS13. | 0.999 |
rplD | rpsL | SAMEA3545320_01989 | SAMEA3545320_01983 | 50S ribosomal protein L4. | 30S ribosomal protein S12. | 0.999 |
rplD | rpsO | SAMEA3545320_01989 | SAMEA3545320_01482 | 50S ribosomal protein L4. | BS18. | 0.999 |
rplD | rpsP | SAMEA3545320_01989 | SAMEA3545320_01916 | 50S ribosomal protein L4. | BS17. | 0.995 |
rplD | rpsS | SAMEA3545320_01989 | SAMEA3545320_01992 | 50S ribosomal protein L4. | 30S ribosomal protein S19. | 0.999 |
rpsB | rplD | SAMEA3545320_00821 | SAMEA3545320_01989 | Vegetative protein 209. | 50S ribosomal protein L4. | 0.999 |
rpsB | rpsD | SAMEA3545320_00821 | SAMEA3545320_01123 | Vegetative protein 209. | 30S ribosomal protein S4. | 0.999 |
rpsB | rpsF | SAMEA3545320_00821 | SAMEA3545320_00389 | Vegetative protein 209. | BS9. | 0.999 |
rpsB | rpsG | SAMEA3545320_00821 | SAMEA3545320_01984 | Vegetative protein 209. | 30S ribosomal protein S7. | 0.999 |
rpsB | rpsI | SAMEA3545320_00821 | SAMEA3545320_00037 | Vegetative protein 209. | BS10. | 0.999 |
rpsB | rpsJ | SAMEA3545320_00821 | SAMEA3545320_01987 | Vegetative protein 209. | BS13. | 0.999 |
rpsB | rpsL | SAMEA3545320_00821 | SAMEA3545320_01983 | Vegetative protein 209. | 30S ribosomal protein S12. | 0.999 |
rpsB | rpsO | SAMEA3545320_00821 | SAMEA3545320_01482 | Vegetative protein 209. | BS18. | 0.999 |
rpsB | rpsP | SAMEA3545320_00821 | SAMEA3545320_01916 | Vegetative protein 209. | BS17. | 0.999 |
rpsB | rpsS | SAMEA3545320_00821 | SAMEA3545320_01992 | Vegetative protein 209. | 30S ribosomal protein S19. | 0.999 |
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