Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCH43816.1 | SCH43891.1 | SAMEA3545320_00967 | SAMEA3545320_00969 | Uncharacterized protein conserved in bacteria. | Serine dehydratase alpha chain. | 0.604 |
SCH43816.1 | yhaO_2 | SAMEA3545320_00967 | SAMEA3545320_00968 | Uncharacterized protein conserved in bacteria. | Inner membrane transport protein YhaO. | 0.661 |
SCH43816.1 | ywrD | SAMEA3545320_00967 | SAMEA3545320_00966 | Uncharacterized protein conserved in bacteria. | Putative gamma-glutamyltransferase ywrD. | 0.400 |
SCH43891.1 | SCH43816.1 | SAMEA3545320_00969 | SAMEA3545320_00967 | Serine dehydratase alpha chain. | Uncharacterized protein conserved in bacteria. | 0.604 |
SCH43891.1 | yhaO_2 | SAMEA3545320_00969 | SAMEA3545320_00968 | Serine dehydratase alpha chain. | Inner membrane transport protein YhaO. | 0.858 |
yhaO_2 | SCH43816.1 | SAMEA3545320_00968 | SAMEA3545320_00967 | Inner membrane transport protein YhaO. | Uncharacterized protein conserved in bacteria. | 0.661 |
yhaO_2 | SCH43891.1 | SAMEA3545320_00968 | SAMEA3545320_00969 | Inner membrane transport protein YhaO. | Serine dehydratase alpha chain. | 0.858 |
ywrD | SCH43816.1 | SAMEA3545320_00966 | SAMEA3545320_00967 | Putative gamma-glutamyltransferase ywrD. | Uncharacterized protein conserved in bacteria. | 0.400 |