STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbaFructose-bisphosphate aldolase. (321 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase.
 
 
 0.989
pgk
Phosphoglycerate kinase.
  
 0.972
pgi
Glucose-6-phosphate isomerase.
  
 
 0.961
pfkA
6-phosphofructokinase.
  
 
 0.958
gapA
Glyceraldehyde-3-phosphate dehydrogenase A.
  
 0.954
pyk
Pyruvate kinase.
  
 0.948
fruA
EIIABC-Fru.
  
 
 0.942
ptsG
EIICBA-Glc.
  
 
 0.911
glpX
Fructose-1%2C6-bisphosphatase class 2.
  
 
 0.879
tkt_1
Transketolase.
  
 
 0.877
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.