STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
infBTranslation initiation factor IF-2. (830 aa)    
Predicted Functional Partners:
rpsB
Vegetative protein 209.
 
 0.997
rpsC
BS2.
  
 0.997
rpsE
30S ribosomal protein S5.
  
 0.997
rpsD
30S ribosomal protein S4.
   
 0.996
SCH63677.1
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family.
  
 0.996
rpsG
30S ribosomal protein S7.
  
 0.996
rplD
50S ribosomal protein L4.
  
 0.996
rpsS
30S ribosomal protein S19.
  
 0.996
rpsK
30S ribosomal protein S11.
  
 0.996
nusA
Transcription elongation protein nusA.
  
 0.993
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.