STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH88262.1OmpA-like transmembrane domain. (211 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing].
  
 
  0.796
ygaD
Competence damage-inducible protein A.
    
  0.794
guaB
Inosine-5'-monophosphate dehydrogenase.
  
 
 0.762
tolC
Outer membrane protein tolC precursor.
   
 0.707
cirA_1
Colicin I receptor precursor.
     
 0.675
SCH52343.1
Organic solvent tolerance protein OstA.
     
 0.669
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing].
   
 
 0.625
deoD
Purine nucleoside phosphorylase deoD-type.
   
 
  0.588
hxuB_1
Heme/hemopexin transporter protein huxB precursor.
     
 0.573
hxuB_2
Heme/hemopexin transporter protein huxB precursor.
     
 0.573
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.