STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCH97024.1Recombination protein F. (549 aa)    
Predicted Functional Partners:
hsdS
Type I restriction enzyme EcoKI specificity protein.
  
  
 0.776
SCG98068.1
Protein of uncharacterised function (DUF3298).
  
     0.742
SCH10168.1
Divergent AAA domain.
  
    0.733
yggG_1
Uncharacterized metalloprotease yggG.
  
    0.727
prn_3
P.94.
  
     0.724
prn_4
P.94.
  
     0.717
prn_1
P.94.
  
     0.713
prn_5
P.94.
  
     0.711
SCH52343.1
Organic solvent tolerance protein OstA.
  
     0.695
topB_2
DNA topoisomerase 3.
       0.675
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.