STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpC_2Propionyl-CoA:succinate CoA transferase. (441 aa)    
Predicted Functional Partners:
porA_1
Pyruvate synthase subunit porA.
    
 0.854
porA_2
Pyruvate synthase subunit porA.
    
 0.854
porA_4
Pyruvate synthase subunit porA.
    
 0.854
porA_6
Pyruvate synthase subunit porA.
    
 0.854
abfD_2
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase.
 
  
 0.783
SCI12094.1
Acyl-CoA dehydrogenase%2C short-chain specific.
  
 
 0.686
citZ
Citrate synthase 2.
   
 0.673
eutD
Ethanolamine utilization protein eutD.
    
 0.644
ackA
Acetate kinase.
     
 0.639
dhaT_1
1%2C3-propanediol dehydrogenase.
  
 
 0.613
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.