STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreB_2Rod shape-determining protein MreB. (346 aa)    
Predicted Functional Partners:
SCI13505.1
Rod shape-determining protein MreC.
 
 
 0.994
ftsI
Peptidoglycan synthase FtsI precursor.
 
 
 0.961
mrdB
Rod shape-determining protein RodA.
 
 
 0.925
SCH46890.1
Uncharacterized protein conserved in bacteria.
  
 
 0.885
SCI13534.1
Rod shape-determining protein MreD.
  
  
 0.871
minD
Cell division inhibitor MinD.
 
 
 0.820
lutB
Lactate utilization protein B.
   
   0.742
ftsW
Cell division protein FtsW.
 
 
 0.673
ftsZ
Cell division protein FtsZ.
  
 
 0.660
SCI13660.1
Radical SAM family uncharacterized protein.
       0.604
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.