STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCI16274.1Transcriptional repressor DicA. (120 aa)    
Predicted Functional Partners:
yigZ
IMPACT family member yigZ.
       0.581
SCH25102.1
Putative selenium-dependent hydroxylase accessory protein YqeC.
  
  
  0.423
immR_1
HTH-type transcriptional regulator immR.
  
     0.417
SCH96174.1
Addiction module toxin%2C RelE/StbE family.
    
 0.416
mobA_1
DNA strand transferase.
  
     0.409
hgdA
(R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha.
  
     0.403
Your Current Organism:
uncultured Megasphaera sp.
NCBI taxonomy Id: 165188
Other names: u. Megasphaera sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.