STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANE03352.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
ANE05256.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
ANE03351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.679
ANE03354.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.585
ANE03546.1
Resuscitation-promoting factor Rpf2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.548
ANE03890.1
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.457
ANE04435.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.457
ANE04427.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.417
Your Current Organism:
Corynebacterium crudilactis
NCBI taxonomy Id: 1652495
Other names: C. crudilactis, CCUG 69192, Corynebacterium crudilactis Zimmermann et al. 2016, Corynebacterium sp. DSM 100882, Corynebacterium sp. JZ16, DSM 100882, LMG 29813, LMG:29813, strain JZ16
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