STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCC78059.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
SCC79287.1
Hypothetical protein.
  
     0.744
SCC82511.1
Phasin.
  
     0.742
SCC81921.1
Apolipoprotein A1/A4/E domain-containing protein.
  
     0.739
SCC80424.1
Putative peptidoglycan binding domain-containing protein.
  
     0.736
SCC78851.1
Protein of unknown function.
  
     0.730
SCC82510.1
Phasin protein.
  
     0.708
SCC81699.1
Invasion protein IalB, involved in pathogenesis.
  
     0.696
SCC82358.1
Protein of unknown function.
  
     0.695
SCC82392.1
Protein of unknown function.
  
     0.678
SCC79961.1
Hypothetical protein.
  
     0.675
Your Current Organism:
Salinarimonadaceae bacterium HL109
NCBI taxonomy Id: 1653334
Other names: Rhizobiales bacterium HL-109, S. bacterium HL-109, Salinarimonadaceae bacterium HL-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.