STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthase; Belongs to the prokaryotic GSH synthase family. (319 aa)    
Predicted Functional Partners:
SCC80948.1
Acetyl esterase/lipase.
       0.809
gor
NADPH-glutathione reductase; Maintains high levels of reduced glutathione.
  
  
 0.807
gshA
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
    
 0.789
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
    
 0.778
SCC81504.1
Glutaredoxin.
    
 0.752
SCC78717.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.749
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.745
gltB
Glutamate synthase (NADPH/NADH) large chain.
    
 0.739
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 0.735
SCC82040.1
GNAT-family acetyltransferase TIGR03103.
    
 0.735
Your Current Organism:
Salinarimonadaceae bacterium HL109
NCBI taxonomy Id: 1653334
Other names: Rhizobiales bacterium HL-109, S. bacterium HL-109, Salinarimonadaceae bacterium HL-109
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