STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asmAAsmA protein. (621 aa)    
Predicted Functional Partners:
SCC78282.1
AsmA-like C-terminal region.
 
   
 0.755
SCC80915.1
Predicted membrane protein.
  
     0.738
SCC81779.1
Uncharacterized membrane protein.
  
     0.719
SCC81471.1
Hypothetical protein.
  
     0.705
SCC82392.1
Protein of unknown function.
  
     0.705
SCC78239.1
Opacity protein.
  
     0.702
SCC81808.1
Hypothetical protein.
  
     0.697
G
Putative Flp pilus-assembly TadE/G-like.
  
     0.662
SCC81701.1
Hypothetical protein.
  
     0.661
bfd
BFD-like [2Fe-2S] binding domain-containing protein.
  
     0.657
Your Current Organism:
Salinarimonadaceae bacterium HL109
NCBI taxonomy Id: 1653334
Other names: Rhizobiales bacterium HL-109, S. bacterium HL-109, Salinarimonadaceae bacterium HL-109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.