STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001754075_00193Unannotated protein. (346 aa)    
Predicted Functional Partners:
GCA_001754075_01225
Unannotated protein.
 
  
 0.997
GCA_001754075_00192
Unannotated protein.
  
 0.996
GCA_001754075_00194
Unannotated protein.
 
 0.995
GCA_001754075_01224
Unannotated protein.
 
 0.990
GCA_001754075_00195
Unannotated protein.
 
 0.971
GCA_001754075_01223
Unannotated protein.
 
 0.970
GCA_001754075_00187
Unannotated protein.
 
 0.969
GCA_001754075_00208
Unannotated protein.
 
 
 0.938
GCA_001754075_01393
Unannotated protein.
  
 
 0.918
GCA_001754075_00082
Unannotated protein.
 
 
 0.896
Your Current Organism:
Merdimonas faecis
NCBI taxonomy Id: 1653435
Other names: Clostridium sp. BR31, JCM 30748, KCTC 15482, M. faecis, Merdimonas faecis Seo et al. 2017, strain BR31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.