STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001754075_01743Unannotated protein. (291 aa)    
Predicted Functional Partners:
GCA_001754075_00951
Unannotated protein.
 
 
 0.990
GCA_001754075_02434
Unannotated protein.
 
  
 0.990
GCA_001754075_01797
Unannotated protein.
  
 0.960
GCA_001754075_01742
Unannotated protein.
      0.868
GCA_001754075_02149
Unannotated protein.
 
   
 0.867
GCA_001754075_01532
Unannotated protein.
 
   
 0.856
GCA_001754075_01086
Unannotated protein.
 
  
 0.821
GCA_001754075_01188
Unannotated protein.
 
   
 0.759
GCA_001754075_01744
Unannotated protein.
     
 0.693
GCA_001754075_01741
Unannotated protein.
       0.613
Your Current Organism:
Merdimonas faecis
NCBI taxonomy Id: 1653435
Other names: Clostridium sp. BR31, JCM 30748, KCTC 15482, M. faecis, Merdimonas faecis Seo et al. 2017, strain BR31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.