STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_0192Transcriptional regulator. (459 aa)    
Predicted Functional Partners:
THC_0193
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.862
THC_0194
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
    0.860
THC_0191
Hypothetical protein.
       0.795
THC_0548
RNA polymerase, sigma 54 subunit, RpoN.
 
  
 0.774
THC_0197
Flagellar motor switch protein FliG.
  
  
 0.764
THC_0196
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.762
THC_0198
Flagellar assembly protein FliH.
  
  
 0.759
fliE
Flagellar hook-basal body complex subunit FliE.
  
  
 0.755
THC_0199
ATP synthase.
  
    0.723
THC_0201
Hypothetical protein.
  
    0.710
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.