STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_0371Hypothetical protein. (158 aa)    
Predicted Functional Partners:
THC_0367
Hypothetical protein.
       0.757
THC_0368
uspA domain-containing protein.
       0.757
THC_0369
Hypothetical protein.
       0.757
THC_0370
Permease.
       0.757
THC_0372
Fis family transcriptional regulator.
       0.492
THC_0373
Hypothetical protein.
       0.489
THC_0374
Multidrug transporter AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.488
THC_0375
Acriflavin resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.479
THC_0376
Transporter.
       0.479
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.