STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_0664Hypothetical protein. (232 aa)    
Predicted Functional Partners:
THC_0667
Methyltransferase type 12.
  
     0.747
THC_0663
DNA-binding protein.
       0.727
THC_0662
DNA polymerase III subunit beta.
       0.698
THC_0661
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
     0.680
THC_1818
Hypothetical protein.
  
     0.657
THC_0471
Hypothetical protein.
  
     0.477
THC_0397
Hypothetical protein.
  
     0.465
THC_1067
Hypothetical protein.
  
     0.436
THC_0613
tonB-denpendent receptor.
  
     0.434
THC_0659
Hypothetical protein.
 
     0.433
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.