STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_0675Hypothetical protein. (306 aa)    
Predicted Functional Partners:
THC_0674
Fe-S cluster protein.
       0.773
THC_0740
Hypothetical protein.
 
   
 0.696
THC_0412
Chromosome partitioning protein.
  
 
 0.663
THC_0939
Chromosome partitioning protein ParA.
  
 
 0.663
THC_1007
Hypothetical protein.
 
     0.525
THC_0444
Hypothetical protein.
  
     0.444
THC_0378
ATPase AAA.
  
  
 0.439
THC_1783
DNA polymerase I.
  
  
 0.427
THC_0623
Hypothetical protein.
 
  
 0.410
THC_1550
Hypothetical protein.
  
     0.410
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.