STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_0981Sugar transporter. (696 aa)    
Predicted Functional Partners:
THC_0477
Molecular chaperone TorD.
  
  
 0.799
THC_0671
uroporphyrin-III C-methyltransferase.
  
  
 0.708
THC_1426
Hypothetical protein.
  
  
0.649
THC_0590
Menaquinol oxidoreductase.
  
  
 0.645
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.627
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.598
THC_1604
Hypothetical protein.
 
  
 0.582
THC_0168
Hypothetical protein.
  
  
 0.575
THC_0625
Hypothetical protein.
  
  
 0.575
THC_0209
Molybdenum cofactor biosynthesis protein MoeB.
     
 0.570
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.