STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THC_1036Hypothetical protein. (261 aa)    
Predicted Functional Partners:
THC_1035
Hypothetical protein.
       0.789
THC_1034
Phosphatidylethanolamine-binding protein.
       0.757
THC_1785
PBS lyase.
  
     0.757
THC_1428
Hypothetical protein.
  
     0.741
THC_1800
acetyl-CoA carboxylase.
 
    0.724
THC_0673
Hypothetical protein.
 
     0.695
THC_0289
Hypothetical protein.
  
     0.631
THC_1033
Peptidase M48 Ste24p.
 
    0.618
THC_0316
Hypothetical protein.
  
    0.604
THC_0150
Flagellar hook-associated protein FlgK.
  
   
 0.595
Your Current Organism:
Caldimicrobium thiodismutans
NCBI taxonomy Id: 1653476
Other names: C. thiodismutans, Caldimicrobium thiodismutans Kojima et al. 2016, DSM 29380, NBRC 110713, Thermodesulfobacteriaceae bacterium TF1, strain TF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.